Amira for Life Sciences

3D visualization and analysis software

Amira software is a powerful, multifaceted 3D platform for visualizing, manipulating, and understanding life sciences data from computed tomography, microscopy, MRI, and many other imaging modalities. 
With incredible speed and flexibility, Amira software enables advanced 3D imaging workflows for specialists in research areas ranging from molecular and cellular biology to neuroscience and bioengineering.

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Amira for Cell Biology

Amira software provides a comprehensive array of tools for the flexible and accurate analysis of time series data of cellular processes. It enables researchers to perform dedicated segmentation workflows on their intra- and intercellular images and apply powerful automated object tracking.

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Amira for Neuroscience

Amira 3D analysis software supports researchers in the most frequently used image analysis techniques, such as filament tracing and editing, DTI analysis, brain perfusion analysis, and object tracking.

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From image to understanding

From reconstructed geometries or any imported 3D data, including time series, Amira software delivers a wide range of visualization techniques and interactive manipulation capabilities. Through a comprehensive set of 3D post-processing tools, it offers a highly flexible and powerful 3D visualization and analysis platform.

Import & process

Import any 2D / 3D image data or time series from multiple modalities: Optical and Electron Microscopes, CT-scanners, Nano-tomographs, Synchrotrons…

Align and register image stacks. Apply advanced image filters and operators to dramatically enhance image quality.

Use powerful thresholding and segmentation tools, correlation plot, object separation, filament and network tracing, to perform advanced processing on your 3D data and reveal and identify features and structures.

Visualize and explore

Amira software provides fast, interactive and high-quality visualization techniques and easy-to-use tools to explore and perform visual analytics on your 3D data:

  • High-quality volume rendering
  • Colormaps and transparencies
  • Clipping, Probing, Slicing
  • Isolines and surfaces

Analyze and quantify

Analyze and understand your data with a comprehensive set of tools for volume and surface measurements of distances, angles, surface, volumes, density, distribution…

Utilize Amira software's unique quantification capabilities to extract advanced statistical and geometrical information.

Benefit from dedicated modules for neuron tracing, fiber tracking, and more.

Share and communicate

Create high quality presentations. Build and export movie clips and animations.

Integrate 3D annotations and measurements. Mix volume, geometries and flow and simulation data visualization.

Generate output for multi-screen display, stereoscopic and even immersive environments.

User stories

Amira software is a popular 3D data analysis software application, used daily by thousands of researchers and scientists worldwide.

Amira user stories

Scientific publications

Documents and Links

Amira Software for Life Sciences brochure

Read how Amira software allows to get more detailed insight in life sciences data sets.

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